DisGeNET - a database of gene-disease associations

List of associated variants

Diabetes Mellitus, Non-Insulin-Dependent, C0011860

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs200803778	LINC02010	1.000	0.080	3	146921799	non coding transcript exon variant	TTTG/-	delins		1.0E-02	1
rs201486960		1.000	0.080	12	84532353	intergenic variant	AAGA/-	delins			1
rs3214606	FLJ13224 ; SINHCAF	1.000	0.080	12	31324008	5 prime UTR variant	TAAG/-;TAAGTAAG	delins		7.9E-03	1
rs33981001	ANK1	1.000	0.080	8	41655130	3 prime UTR variant	GTGTGTGT/-;GT;GTGT;GTGTGT;GTGTGTGTGT;GTGTGTGTGTGT;GTGTGTGTGTGTGT;GTGTGTGTGTGTGTGT;GTGTGTGTGTGTGTGTGT	delins		0.44	1
rs34204798	ZMIZ1	1.000	0.080	10	79191374	intron variant	G/-;GG;GGG;GGGG	delins			1
rs386418874	TCF7L2	1.000	0.080	10	112988102	intron variant	GT/-;GTGT;GTGTGT	delins			1
rs67148051		1.000	0.080	13	32979947	intergenic variant	ACAG/-;ACAGACAG	delins			1
rs72156956		1.000	0.080	2	640987	intergenic variant	TACA/-;TACATACA	delins			1
rs753056119	HNF4A	1.000	0.080	20	44424348	frameshift variant	C/-	delins			1
rs782100977		1.000	0.080	X	48866249	intergenic variant	AAAAAA/-;AAAAA;AAAAAAA;AAAAAAAA;AAAAAAAAA;AAAAAAAAAA	delins			1
rs1217691063	MTHFR	0.330	0.920	1	11796309	missense variant	A/G	snv	4.0E-06	7.0E-06	614
rs397507444	MTHFR	0.405	0.880	1	11794407	missense variant	T/G	snv			306
rs6265	BDNF ; BDNF-AS	0.436	0.760	11	27658369	missense variant	C/T	snv	0.19	0.15	272
rs1800562	LOC108783645 ; HFE	0.435	0.880	6	26092913	missense variant	G/A	snv	3.3E-02	3.8E-02	262
rs4680	COMT ; MIR4761	0.442	0.920	22	19963748	missense variant	G/A	snv	0.46	0.44	249
rs1799983	NOS3	0.430	0.880	7	150999023	missense variant	T/A;G	snv	0.75		246
rs1042522	TP53	0.426	0.800	17	7676154	missense variant	G/C;T	snv	0.67		242
rs759834365	BDNF-AS ; BDNF	0.448	0.760	11	27658456	missense variant	C/T	snv	1.2E-05		237
rs1799945	LOC108783645 ; HFE	0.452	0.760	6	26090951	missense variant	C/G;T	snv	0.11	0.10	226
rs4986790	TLR4	0.438	0.800	9	117713024	missense variant	A/G;T	snv	6.1E-02; 4.0E-06		223
rs1045642	ABCB1	0.456	0.840	7	87509329	synonymous variant	A/G;T	snv	0.50		214
rs25487	XRCC1	0.441	0.800	19	43551574	missense variant	T/C	snv	0.68	0.71	205
rs2910164	MIR3142HG ; MIR146A	0.447	0.880	5	160485411	mature miRNA variant	C/G	snv	0.71; 4.1E-06	0.70	193
rs1695	GSTP1	0.457	0.880	11	67585218	missense variant	A/G	snv	0.34	0.36	188
rs4986791	TLR4	0.456	0.840	9	117713324	missense variant	C/T	snv	5.7E-02	4.9E-02	182